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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904845.1_cds_XP_016454969.1_48942
CDS Infomation

[gene=LOC107779133] [db_xref=GeneID:107779133] [protein=E3 ubiquitin-protein ligase At1g63170-like] [protein_id=XP_016454969.1] [location=complement(join(1565..1711,2157..2526,3637..4133))] [gbkey=CDS]
Sequence

ATGAATAGCCGTTACTTCATTACAACAGACTCGTTATGTAGTTCTCGAGTTGTTGTTCCT
TTCCCGACAATTGCAACTGAAGTTGTGGGAGAAACAATGGATGTTAATGTTAGAAACATG
TCTTTATCAAGGACACCTCTTTCTTCATTCTTGATAAGAATGACTATTAGAATATCAAGA
TCAAGGTGTTTCAGTTTCTTAAGGAGGGTGTTTCATTACCAAAATGGTTCAAGATCAGAA
CTTGGTTCAAATCCTTTTAATTCTGTGATTTGGATGATGATGGAGTGCATAGCTTTAAGT
ATTCAGATAATTGTCATAGCATACACATTGGCTATTTCAAAGGAAGAAAGGCCAGTTTGG
CCAATGAGGATTTGGGTATTTGGATATTCTTTTGGATGTGTACTTTGTCTGATTCTGCTT
TATTGGCGCTATTGGGCATTATATATCAGGCAAAGAGATGATATTGAGCAGCAAATAAAC
CATGATGATGAATCAAGGGCCTTGCCGCCTCTACTGGAGAGATGTCGGACTTGTATAGAA
TTGTTCTTCGCCATATGGTTTGTAATGGGAAATGTTTGGGTGTTTGATTCACGCTTTGGA
TCATTTCATCGTGCTCCAAAACTTCATGTCCTCTGCATCTCACTGCTAGCTTGGAATGCT
ATCACTTACTCTTTCCCCTTCATATTGTTTGTATTGTTATGCTGTTGTGTGCCAATTTTG
AGTAGTCTTCTTGGCTATAACATGAACATGGGATCACTCGATCGAGGCGCATCTGATGAA
CAACTCTCCAATTTACCTAGCTGGAAATACAAGGAAATTGGAAATAAACAGGAGTTTCAG
ACTTCAGCTATAGATAATGAAAATGCTGAATGTTGTATCTGTTTGGCCAAGTACAGAGAC
AAAGAAGAGATGAGAGAGTTGCCTTGTTCTCATATATTCCATCTCAAATGTGTGGATCAA
TGGCTCAGAATTATATCTTGTTGTCCTCTCTGTAAACAAGAATTAGAGAGGTAA

Peptide Sequence

PEP ID

XP_016454969.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Nicotiana tabacum]
Sequence

MNSRYFITTDSLCSSRVVVPFPTIATEVVGETMDVNVRNMSLSRTPLSSFLIRMTIRISR
SRCFSFLRRVFHYQNGSRSELGSNPFNSVIWMMMECIALSIQIIVIAYTLAISKEERPVW
PMRIWVFGYSFGCVLCLILLYWRYWALYIRQRDDIEQQINHDDESRALPPLLERCRTCIE
LFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCISLLAWNAITYSFPFILFVLLCCCVPIL
SSLLGYNMNMGSLDRGASDEQLSNLPSWKYKEIGNKQEFQTSAIDNENAECCICLAKYRD
KEEMRELPCSHIFHLKCVDQWLRIISCCPLCKQELER

Transcript Sequence

Gene sequence data has not been registered.